InfiniumPurify - Estimate and Account for Tumor Purity in Cancer Methylation Data
Analysis
The proportion of cancer cells in solid tumor sample,
known as the tumor purity, has adverse impact on a variety of
data analyses if not properly accounted for. We develop
'InfiniumPurify', which is a comprehensive R package for
estimating and accounting for tumor purity based on DNA
methylation Infinium 450k array data. 'InfiniumPurify' provides
functionalities for tumor purity estimation. In addition, it
can perform differential methylation detection and tumor sample
clustering with the consideration of tumor purities.