{ "_id": "6a3a3b8d6265ec60d6209b56", "Package": "InfiniumPurify", "Type": "Package", "Title": "Estimate and Account for Tumor Purity in Cancer Methylation Data\nAnalysis", "Version": "1.3.1", "Date": "2017-1-8", "Author": "Yufang Qin", "Maintainer": "Yufang Qin ", "Description": "The proportion of cancer cells in solid tumor sample,\nknown as the tumor purity, has adverse impact on a variety of\ndata analyses if not properly accounted for. We develop\n'InfiniumPurify', which is a comprehensive R package for\nestimating and accounting for tumor purity based on DNA\nmethylation Infinium 450k array data. 'InfiniumPurify' provides\nfunctionalities for tumor purity estimation. In addition, it\ncan perform differential methylation detection and tumor sample\nclustering with the consideration of tumor purities.", "License": "GPL-2", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-23 07:50:00 UTC", "User": "root" }, "Repository": "https://aipao757.r-universe.dev", "Date/Publication": "2017-01-14 11:12:25 UTC", "RemoteUrl": "https://github.com/cran/InfiniumPurify", "RemoteRef": "HEAD", "RemoteSha": "212851ade813327d3a88daba5b99a26ae6f77912", "MD5sum": "fe9ab5b40c5778817eff44b3677e4c7b", "_user": "aipao757", "_type": "src", "_file": "InfiniumPurify_1.3.1.tar.gz", "_fileid": "1882a9448b520d4ec070138dddaf95d235d320d157f3499178b5a45f7bc5e65d", "_filesize": 928844, "_sha256": "1882a9448b520d4ec070138dddaf95d235d320d157f3499178b5a45f7bc5e65d", "_created": "2026-06-23T07:50:00.000Z", "_published": "2026-06-23T07:53:49.424Z", "_distro": "noble", "_jobs": [ { "job": 82903505617, "time": 101, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", 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"beta.emp", "topics": [ "beta.emp" ] }, { "page": "CancerTypeAbbr", "title": "Print abbreviations of cancer types with known iDMCs.", "topics": [ "CancerTypeAbbr" ] }, { "page": "getPurity", "title": "Estimate the tumor purity for 450K methylation data", "topics": [ "getPurity" ] }, { "page": "iDMC", "title": "iDMC", "topics": [ "iDMC" ] }, { "page": "InfiniumClust", "title": "Tumor sample clustering from Infinium 450k array data", "topics": [ "InfiniumClust" ] }, { "page": "InfiniumDMC", "title": "Differentially Methylation Calling accounting for tumor purity", "topics": [ "InfiniumDMC" ] }, { "page": "InfiniumPurify", "title": "Purify tumor methylomes caused by normal cell contamination.", "topics": [ "InfiniumPurify" ] } ], "_rundeps": [ "matrixStats" ], "_score": 2.146128035678238, "_indexed": true, "_nocasepkg": "infiniumpurify", "_universes": [ "aipao757" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.3.1", "date": "2026-06-23T07:51:42.000Z", "distro": "noble", 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